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Data
History.
Notes
on the insertion of patterns into the M.bovis spoligotype
database.
1.
A database of 685 unique spoligotype patterns obtained from
RIVM was screened for patterns with a zero at position 39. 285 patterns
were obtained and initially used to populate the database on 28/05/03.
2.
5 patterns from the UK added. These patterns had been allocated
STXXX numbers by RIVM. 27/06/03. Highest number in database SB0816
3.
19/Aug/03. Submitted 161 strains from
HADDAD,N.,
A. OSTYN, C. KAROUI, M. MASSELOT, M. F. THOREL, S. L. HUGHES,
J. INWALD, R. G. HEWINSON, B. DURAND (2001). Spoligotype Diversity
of Mycobacterium bovis Strains Isolated in France from 1979
to 2000. JOURNAL OF CLINICAL MICROBIOLOGY : 3623-3632.
28
patterns already present. 133 new ones.
4.
2/Sep/03. 6 patterns from
Njanpop-Lafourcade
BM, Inwald J, Ostyn A, Durand B, Hughes S, Thorel MF, Hewinson G,
Haddad N. Molecular typing of Mycobacterium bovis isolates from
Cameroon.
Journal of Clinical Microbiology 2001 Jan;39(1):222-7.
1
pattern already in 5 patterns added. SB0955
5.
3/Sep/03. Three children of SB0263 added - SB0957-SB0959
6.
7 patterns from
Molecular epidemiology of bovine tuberculosis in the Czech Republic
and Slovakia in the period 1965-2001 studied by spoligotyping
I. Pavlik, L. Dvorska, M. Bartos, I. Parmova, I. Melicharek, A.
Jesenska, M. Havelkova, M. Slosarek, I. Putova, G. Martin, W. Eeler,
K. Kremer, D. van Soolingen. Vet. Med. - Czech, 47, 2002 (7): 181-194.
4
patterns already present , 3 patterns new.
7.
2/Jan/04 - 24 patterns from
Aranaz A, Liébana E, Mateos A, Domínguez L, Vidal
D, Domingo M, González O, Rodríguez-Ferri EF, Van
Embden JDA, Cousins DV. (1996). Spacer oligonucleotide typing of
Mycobacterium bovis strains from cattle and other animals: a tool
for epidemiology of tuberculosis. J Clin Microbiol 34: 2734-2740
11
patterns already present , 13 patterns new.
8.
18/Mar/04 8 patterns from Northern Ireland.
Patterns submitted by Carl McCormick and Robin Skuce.
9.
13/4/2004 Three patterns added by M.L.Boschiroli
10.
15/June/04 Three patterns added by Jorge Gonzalez-y-Merchand
11.
12/July/2004 Microti strain added - Keith Jahans
12.
One pattern added by Irmgard Moser
13.
24/Aug/04 - 3 patterns added from Begium by Karl Walravens
14.
5/Jan/05 Three patterns from France added by Maria Laura Boschiroli
15.
8 Africanum subgroup 1 Clade 1 and Clade 2 added J. Driscoll 24/1/05
16.
8 Spanish caprine and bovine patterns added 25/1/05
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